TABLE 2

Characteristics of enteroviruses recovered from CSF samples using VirCapSeq-VERT

Sample no.StatusNo. of readsEV genomic length (bp)Polyprotein bp position (aa length)Accession no.% genome coverageClosest neighbor (accession no.)% identityReal-time PCR result (copies/ml)
RawMappedntaa
AFM-07AFM3,880,2696,9947,412748–7309 (2,194)MK80011999.00EV-A71 (KU641501.1)99.0099.5011,600
AFM-16Non-AFM17,812,59358,2067,423744–7328 (2,195)MK80012174.80E-25 (HM031191.1)86.3097.90267