TABLE 1 

Summary of viral discovery performed on P. giganteus

VirusNo. of samples PCR positive/no. testeda
UrineThroatFecesRoost urineTotal
Herpesvirus
    PgHV-19/92629/7110/780/2638/1,741
    PgHV-24/9269/7110/780/2613/1,741
    PgHV-31/9260/7110/780/261/1,741
    PgHV-49/92621/7110/780/2630/1,741
    PgHV-51/9260/7110/781/262/1,741
    PgHV-61/9260/7110/780/261/1,741
    PgHV-72/9268/7110/780/2610/1,741
    PgHV-823/926157/7110/780/26180/1,741
    PgHV-90/9263/7110/780/263/1,741
    PgHV-1015/92668/7110/780/2683/1,741
    PgHV-110/9264/7110/780/264/1,741
    PgHV-1210/92699/7110/780/26109/1,741
    PgHV-136/926159/7110/780/26165/1,741
      
Total81/926557/7110/781/26
      
Paramyxovirus
    PgPMV-11/5980/510NTbNT1/1,108
    PgPMV-22/5980/510NTNT2/1,108
    PgPMV-30/5982/510NTNT2/1,108
    PgPMV-40/5981/510NTNT1/1,108
    PgPMV-50/5983/510NTNT3/1,108
    PgPMV-61/5987/510NTNT8/1,108
    PgPMV-70/5982/510NTNT2/1,108
    PgPMV-81/5980/510NTNT1/1,108
    PgPMV-92/5980/510NTNT2/1,108
    PgPMV-101/5981/510NTNT2/1,108
    PgPMV-11 (NiV)1/5982/510NTNT3/1,108
      
Total9/59818/510
      
Polyomavirus
    PgPyV-11/5980/510NTNT1/1,108
    PgPyV-20/5983/510NTNT3/1,108
    PgPyV-33/5981/510NTNT4/1,108
      
Total4/5984/510
      
Coronavirus
    PgCoV-18/8161/745NT5/7014/1,631
    PgCoV-233/81610/745NT17/7060/1,631
    PgCoV-3 (bovine/human-like)1/8160/745NT0/701/1,631
    PgCoV-4 (avian IBV-like)0/8161/745NT0/701/1,631
      
Total42/81612/74522/70
      
Adenovirus
    PgAdV-11/9310/8060/780/871/1,902
    PgAdV-2 (avian AdV)1/9310/8060/780/871/1,902
    PgAdV-34/9314/8060/780/878/1,902
    PgAdV-40/9311/8060/780/871/1,902
    PgAdV-534/93116/8060/783/8753/1,902
    PgAdV-60/9312/8060/780/872/1,902
    PgAdV-711/9311/8060/781/8713/1,902
    PgAdV-817/9312/8060/780/8719/1,902
    PgAdV-95/9311/8060/782/878/1,902
    PgAdV-101/9310/8060/780/871/1,902
    PgAdV-114/9310/8060/780/874/1,902
    PgAdV-121/9310/8060/780/871/1,902
    PgAdV-1322/9313/8060/786/8731/1,902
    PgAdV-1438/93111/8060/785/8754/1,902
      
Total139/93141/8060/7817/87
      
Astrovirus
    PgAstV-10/6961/585NT1/672/1,348
    PgAstV-21/6960/585NT0/671/1,348
    PgAstV-33/6960/585NT8/6711/1,348
    PgAstV-40/6960/585NT2/672/1,348
    PgAstV-50/6960/585NT3/673/1,348
    PgAstV-60/6960/585NT1/671/1,348
    PgAstV-71/6960/585NT0/671/1,348
    PgAstV-80/6960/585NT15/6715/1,348
      
Total5/6961/58530/67
      
Bocavirus
    PgBoV-1 (human BoV)1/9250/7100/780/261/1,739
    PgBoV-2 (human BoV)0/9251/7100/780/261/1,739
      
Total1/9251/7100/780/26
  • a A total of 55 viruses from seven viral families were discovered. The discovery effort (number of samples tested) and prevalence of each virus is presented.

  • b NT, not tested.