TABLE 3

Nonamer sequences of CyCV-VN and 15 different CyCV species and lengths of the stems

CyCV speciesNonamer sequenceaLoop length
VNTAATACTAT11
PK 5006TAATACTAT13
PK 5034TAATACTAT13
PK 5222TAATACTAT13
PK 5510TAATACTAT12
Chimp 11TAATACTAT13
NG12TAATACTAT13
NG 14TAATACTAT11
TN 18TAATACTAT12
NG chicken 8TAATACTAA12
PK goat 11TAATACTAT12
PK goat 21TAATACTAG13
TB bat USATAATACTAT12
Bat GF-4cTAATACTAT11
NG 13TAGTATTAC9
DfCyCV-A1TAATACTAT13
FWCasCyV-GS140TAGTATTAC11
  • a Underlined nucleotides are those that differ from the consensus sequence.