TABLE 2 

BLAST output of regions 1 to 6 against the databasea

BLAST targetb% IdentitycAlignment lengthNo. of:QueryTargetAccession no.
MMdGapsStartEndStartEnd
Query—CL02 region 1
    B. salyersiae CL02T12C01100.0022,005001,23423,2381,381,6061,403,610NZ_JH724307.1
    B. cellulosilyticus CL02T12C19100.0022,005001,23423,2385,32127,325NZ_JH724088.1
    B. dorei CL02T12C0699.9917,671107,19624,866530,799548,469NZ_JH724135.1
    B. eggerthii DSM 2069799.7824,8782510124,866622,697647,557NZ_DS995509.1
    B. plebeius DSM 1713597.9910,412200910,54320,946174,332184,742NZ_DS990131.1
    B. fragilis 3_1_1295.0513,6056154511,28624,8661,817,6951,804,125NZ_EQ973213.1
Query—CL02 region 2
    B. dorei CL02T12C06100.00109,844216,257116,0951,017,432907,589NZ_JH724134.1
    B. salyersiae CL02T12C01100.00109,844416,257116,095567,507677,350NZ_JH724309.1
    P. johnsonii CL02T12C29100.0055,26202155,262109,000164,259NZ_JH976468.1
100.0053,6502162,451116,095178,109231,758NZ_JH976468.1
    B. cellulosilyticus CL02T12C19100.0059,40220159,042290,506231,465NZ_JH724088.1
99.9913,3391059,00272,340231,364218,026NZ_JH724088.1
100.0012,3030075,23387,535214,881202,579NZ_JH724088.1
100.0028,5601087,536116,095202,478173,919NZ_JH724088.1
    B. ovatus CL02T12C0499.5558,0862632758,035116,0955,69763,752NZ_JH724231.1
    Bacteroides sp. strain 3_2_598.7133,02342641233,0102,030,8842,063,856NZ_JH636044.1
97.7924,597543934,62859,2212,065,2642,089,854NZ_JH636044.1
Query—CL03 region 3
    B. uniformis CL03T12C37100.0017,60700117,6079617,702NZ_JH724271.1
    P. merdae CL03T12C32100.0017,60700117,607142,174159,780NZ_JH976456.1
    B. dorei CL03T12C01100.0017,60700117,60717,6071NZ_JH724164.1
    B. eggerthii 1_2_48FAA98.5317,6142457117,60730,38847,994NZ_AKBX01000010.1
    B. plebeius DSM 1713598.4817,61525013217,60730,51648,121NZ_DS990120.2
    B. intestinalis DSM 1739398.5016,77223612216,76617,24534,007NZ_ABJL02000003.1
Query—CL03 region 4
    B. fragilis CL03T12C07100.0060,73400160,734285,831346,564NZ_JH724182.1
    P. distasonis CL03T12C09100.0060,73400160,7342,432,0902,492,823NZ_JH976495.1
    B. xylanisolvens CL03T12C04100.0060,73420160,7342,000,6961,939,963NZ_JH724294.1
    B. ovatus CL03T12C18100.0044,00820144,00831,39975,406NZ_JH724250.1
100.0016,7260044,00860,733215,190231,915NZ_JH724243.1
    B. fragilis NCTC 934399.2038,3652891722,37860,7332,040,4152,078,771NC_003228.3
99.6315,4105521,80117,2092,017,1332,032,541NC_003228.3
    B. helcogenes P 36-10899.6015,4235831,80117,221230,238245,659NC_014933.1
    B. uniformis ATCC 849295.5016,9066525330,50247,366215,548198,710NZ_DS362247.1
Query—CL03 region 5
    B. xylanisolvens CL03T12C04100.0042,54500142,5451,171,6971,214,241NZ_JH724294.1
    B. fragilis CL03T12C07100.0042,54500142,545457,382414,838NZ_JH724184.1
    B. uniformis CL03T12C37100.0042,54520142,545725,544768,088NZ_JH724268.1
    B. ovatus CL03T12C18100.0028,9671013,57842,544205,601176,635NZ_JH724243.1
    Bacteroides sp. strain 3_1_2396.5018,4685615016,31434,7402,449,8652,431,442NZ_GG774949.1
    B. finegoldii DSM 1756596.6017,6114975717,19234,74029,06046,630NZ_GG688325.1
    B. salyersiae DSM 1876597.0316,9784423517,79034,740554,600537,659NZ_KB905466.1
Query—CL03 region 6
    B. xylanisolvens CL03T12C04100.0044,12400144,124388,361344,238NZ_JH724296.1
    P. merdae CL03T12C32100.0026,81700126,817204,214231,030NZ_JH976457.1
100.0016,7010027,42444,124236,576253,276NZ_JH976457.1
    B. ovatus CL03T12C18100.0012,58300112,583530,345542,927NZ_JH724241.1
100.0023,7111012,58436,294545,391569,101NZ_JH724241.1
    B. eggerthii DSM 20697100.0044,12400144,124159,910204,033NZ_DS995511.1
    P. merdae CL09T00C40100.0044,12400144,124372,514416,637NZ_JH976526.1
    Bacteroides sp. strain 3_1_19100.0044,12400144,124180,923225,046NZ_GG774763.1
    Bacteroides sp. strain D22100.0044,12400144,12456,078100,201NZ_GG774819.1
    Alistipes sp. strain HGB5100.0044,12400144,12466,384110,507NZ_AENZ01000040.1
    Alistipes onderdonkii DSM 19147100.0044,12410144,12455,38611,263NZ_KB894552.1
    B. intestinalis DSM 17393100.0044,12401144,124456,857412,735NZ_ABJL02000006.1
    B. stercoris ATCC 43183100.0044,12420144,124103,16859,045NZ_DS499672.1
    P. merdae ATCC 43184100.0044,12411144,12473,390117,512NZ_DS264518.1
    B. fragilis YCH46 DNA100.0044,12411144,124163,822119,700NC_006347.1
  • a All variant IS and RE were removed from query sequences. Boldface indicates strains from a natural ecosystem.

  • b All species belong to Bacteroides or Parabacteroides, unless otherwise indicated.

  • c % Identity was rounded to the closest hundredth of a percent.

  • d MM, mismatches.