TABLE 1 

Whole-genome sequences aligned to the reference genome of Pseudogymnoascus destructans (NCBI accession no. GCA_001641265.1)

Isolate ID no.SpeciesaSourcebLocationcDateRead
length
(bp)
Avg read
depth
% of core
genome
coveredd
Accession no.
20631-21P. destructansM. lucifugusNYFeb 2008NAeNA100.00GCA_001641265.1
GU999986P. destructansM. myotisDEUMar 20092 × 101155.8398.73SRR6011467
GU350433P. destructansM. myotisCHEApr 20092 × 101187.9798.93SRR6011468
GU350434P. destructansM. myotisHUNMar 20092 × 101169.2999.00SRR6011465
20693-1P. destructansM. lucifugusMAMar 20082 × 101206.3999.79SRR6011466
22429-8P. destructansM. septentrionalisWVJan 20092 × 101208.6299.81SRR6011471
22971-3P. destructansM. lucifugusONMar 20102 × 101123.2499.73SRR6011472
22504-1P. destructansM. lucifugusPAMar 20092 × 101192.7399.67SRR6011469
22442-2P. destructansM. lucifugusNJFeb 20092 × 101200.7999.71SRR6011470
22948-1P. destructansM. septentrionalisTNMar 20102 × 101180.4799.49SRR6011473
20674-9P. destructansM. septentrionalisVTMar 20082 × 98100.2599.46SRR6011474
20682-10P. destructansM. septentrionalisMAMar 20082 × 101156.0099.11SRR6011477
22004-1P. destructansM. lucifugusCTApr 20082 × 101213.7899.20SRR6011478
22426-2P. destructansM. lucifugusCTJan 20092 × 101170.4999.42SRR6011475
22469-1P. destructansP. subflavusVAMar 20092 × 101167.0999.42SRR6011476
22480-1P. destructansE. fuscusNYMar 20092 × 9885.8599.43SRR6011481
22884-4WP. destructansM. lucifugusVTJan 20102 × 101141.8899.43SRR6011482
22930-2P. destructansP. subflavusTNFeb 20102 × 10182.9899.03SRR6011479
22949-4P. destructansM. septentrionalisMDMar 20102 × 103211.5999.54SRR6011480
22972-2WP. destructansM. lucifugusONMar 20102 × 10182.4899.03SRR6011483
22997-1P. destructansM. septentrionalisTNApr 20102 × 101271.2099.97SRR6011484
23414-1WP. destructansM. lucifugusINJan 20112 × 98120.0099.59SRR6011493
23434-1WP. destructansM. lucifugusINJan 20112 × 101255.0799.96SRR6011492
23444-1P. destructansM. lucifugusTNFeb 20112 × 9896.6799.49SRR6011491
23455-1P. destructansM. lucifugusVAFeb 20112 × 101163.1799.70SRR6011490
Gd41P. destructansM. myotisFRAMar 20092 × 25189.0499.31SRR6011497
Gd44P. destructansM. myotisUKRFeb 20112 × 30192.6898.71SRR6011496
23874-1P. destructansM. lucifugusMEDec 20112 × 101200.7699.97SRR6011495
23877-1P. destructansM. septentrionalisDEMar 20122 × 101177.3299.97SRR6011494
23897-2P. destructansP. subflavusMOMar 20122 × 251119.8099.93SRR6011489
W41203P. destructansSubNBApr 20122 × 25174.3199.54SRR6011488
JH15CN0111aP. destructansM. petaxCHNMar 20152 × 15074.3196.78SRR6011485
JH16MG088P. destructansP. ogneviMNG20162 × 15078.8497.31SRR6011486
JH16MG093P. destructansP. ogneviMNG20162 × 15015.2853.10SRR6011487
03VT05Pseudogymnoascus sp.SedVT2008NANA76.63GCA_001662645.1
UAMH10579P. verrucosusPeatAB2002NANA76.92GCA_01662655.1
05NY08Pseudogymnoascus sp.SedNY2008NANA76.68GCA_001662605.1
23342-1-I1Pseudogymnoascus sp.P. subflavusWI2008NANA61.20GCA_001662575.1
24MN13Pseudogymnoascus sp.SedMN2008NANA69.28GCA_001662595.1
WSF3629Pseudogymnoascus sp.PeatWI1960NANA77.02GCA_001662585.1
F-103Pseudogymnoascus sp.SoilNYContemporaryNANA76.76GCA_000750895.1
F-3557Pseudogymnoascus sp.Pine postSWEContemporaryNANA52.04GCA_000750665.1
F-3775Pseudogymnoascus sp.SoilDEUContemporaryNANA50.60GCA_000750715.1
F-3808Pseudogymnoascus sp.M. glareolusRUSContemporaryNANA52.51GCA_000750675.1
F-4246Pseudogymnoascus sp.SedMNGContemporaryNANA53.77GCA_000750735.1
F-4281Pseudogymnoascus sp.CryopegRUS0.12–0.2 myafNANA57.09GCA_000750745.1
F-4513Pseudogymnoascus sp.PermafrostRUS1.8–3.0 myaNANA54.09GCA_000750755.1
F-4514Pseudogymnoascus sp.PermafrostRUS1.8–3.0 myaNANA51.80GCA_000750795.1
F-4515Pseudogymnoascus sp.PermafrostRUS1.8–3.0 myaNANA61.24GCA_000750805.1
F-4516Pseudogymnoascus sp.PermafrostRUS1.8–3.0 myaNANA53.86GCA_000750815.1
F-4517Pseudogymnoascus sp.PermafrostRUS1.8–3.0 myaNANA60.86GCA_000750875.1
F-4518Pseudogymnoascus sp.SoilRUSContemporaryNANA67.47GCA_000750925.1
F-4519Pseudogymnoascus sp.SoilRUSContemporaryNANA77.04GCA_000750935.1
F-4520Pseudogymnoascus sp.SoilRUSContemporaryNANA67.01GCA_000750935.1
ATCC 16222P. pannorumSoilDEUNANANA58.08GCA_001630605.1
M1372P. pannorumSoilCAJun 1961NANA58.55GCA_000497305.1
ZnO. maiusNANANANANA0.29GCA_000827325.1
  • a The species shown are Pseudogymnoascus destructans, Pseudogymnoascus verrucosus, Pseudogymnoascus sp., Pseudogymnoascus pannorum, and Oidiodendron maius.

  • b The species shown are Myotis myotis, Myotis lucifugus, Myotis septentrionalis, Perimyotis subflavus, Eptesicus fuscus, Myotis petax, Plecotus ognevi, and Myodes glareolus (bank vole). Sub, hibernaculum substrate (i.e., roosting surface); Sed, hibernaculum sediment.

  • c NY, New York; DEU, Germany; CHE, Chechnya; HUN, Hungary; MA, Massachusetts; WV, West Virginia; ON, Ontario, Canada; PA, Pennsylvania; NJ, New Jersey; TN, Tennessee; VT, Vermont; CT, Connecticut; VA, Virginia; MD, Maryland; IN, Indiana; FRA, France; UKR, Ukraine; ME, Maine; DE, Delaware; MO, Missouri; NB, New Brunswick; CHN, China; MNG, Montenegro; AB, Alberta; WI, Wisconsin; MN, Minnesota; SWE, Sweden; RUS, Russia; CA, California. 

  • d Coverage reported as percentage of core genome (i.e., portion of genome shared by all samples that is not in a duplicated region) that passed 10× minimum depth of coverage and 90% of read agreement filters.

  • e NA, not available.

  • f mya, million years ago.