TABLE 2 

Annotation of core SNP loci from isolates of P. destructans from North America

Accession no.PositionTypeVariant isolate(s)Protein ID no.Product
KV441386.11202839UTRa20693-1_MA_2008OAF63413.1NAD synthase
KV441386.12276958Intergenic22948-1_TN_2010NAbNA
KV441395.1783753UTR22948-1_TN_2010OAF58958.1Hypothetical protein
KV441396.1546602Intergenic23444-1_TN_2011NANA
KV441398.1551631UTR23877-1_DE_2012OAF57976.1Hypothetical protein
KV441399.1235966Intergenic23414-1W_IN_2011,
23434-1W_IN_2011
NANA
KV441400.1640730UTR22442-2_NJ_2009OAF57273.1Hypothetical protein
KV441401.1139816Intergenic22948-1_TN_2010NANA
KV441402.172139Intergenic23897-2_MO_2012NANA
KV441402.1226767UTR22948-1_TN_2010OAF56852.1Hypothetical protein
KV441402.1510412Intergenic20693-1_MA_2008NANA
KV441404.1262446UTR22442-2_NJ_2009OAF56419.1Hypothetical protein
KV441387.1430984Intergenic23874-1_ME_2012NANA
KV441387.1820735UTR22426-2_CT_2009OAF62808.1Hypothetical protein
KV441387.11825781Intergenic22948-1_TN_2010NANA
KV441387.12082665UTR22442-2_NJ_2009OAF62574.1ESCRT-I complex subunit VPS28
KV441387.1685734Intergenic22442-2_NJ_2009NANA
KV441387.1785423Intergenic23897-2_MO_2012NANA
KV441387.154855Intergenic22971-3_ON_2010NANA
KV441387.1193542Intergenic22948-1_TN_2010NANA
KV441387.1253155Intergenic22442-2_NJ_2009NANA
KV441387.177282Intergenic23455-1_VA_2011NANA
KV441387.1120236Intergenic23897-2_MO_2012NANA
KV441388.1775461Intragenic22972-2W_ON_2010OAF61744.1Hypothetical protein
KV441388.1950597Intron23897-2_MO_2012OAF61915.1Hypothetical protein
KV441388.1120202UTR22469-1_VA_2009OAF62044.1Hypothetical protein
KV441388.157283UTR20631-21_NY_2008OAF61813.1Hypothetical protein
KV441389.1343287Intron23455-1_VA_2011OAF61688.1AGC/AKT protein kinase
KV441389.1419134Intergenic23414-1W_IN_2011NANA
KV441389.1867065UTR22004-1_CT_2008OAF61368.1Actin cytoskeleton-regulatory complex protein end3
KV441389.11173430Intergenic22971-3_ON_2010NANA
KV441389.11173432Intergenic22971-3_ON_2010NANA
KV441389.150002UTR22948-1_TN_2010OAF61394.1Hypothetical protein
KV441390.1643943Intergenic23897-2_MO_2012NANA
KV441390.1659862UTR22948-1_TN_2010OAF61216.1Hypothetical protein
KV441390.1861423UTR22948-1_TN_2010OAF60933.1Hypothetical protein
KV441390.11243398UTR23434-1W_IN_2011OAF60771.1Hypothetical protein
KV441390.11524359UTR22948-1_TN_2010OAF60872.1Hypothetical protein
KV441391.1151986UTR20693-1_MA_2008OAF60366.1Hypothetical protein
KV441391.11184294Intergenic22442-2_NJ_2009NANA
KV441392.1712894Intergenic23414-1W_IN_2011NANA
  • a UTR, untranslated region of exon.

  • b NA, not available.