TABLE 2 

Annotation of core SNP loci from isolates of P. destructans from North America

Accession no.PositionTypeVariant isolate(s)Protein ID no.Product
KV441386.1 1202839UTRa20693-1_MA_2008OAF63413.1NAD synthase
KV441386.1 2276958Intergenic22948-1_TN_2010NAbNA
KV441395.1 783753UTR22948-1_TN_2010OAF58958.1Hypothetical protein
KV441396.1 546602Intergenic23444-1_TN_2011NANA
KV441398.1 551631UTR23877-1_DE_2012OAF57976.1Hypothetical protein
KV441399.1 235966Intergenic23414-1W_IN_2011,
23434-1W_IN_2011
NANA
KV441400.1 640730UTR22442-2_NJ_2009OAF57273.1Hypothetical protein
KV441401.1 139816Intergenic22948-1_TN_2010NANA
KV441402.1 72139Intergenic23897-2_MO_2012NANA
KV441402.1 226767UTR22948-1_TN_2010OAF56852.1Hypothetical protein
KV441402.1 510412Intergenic20693-1_MA_2008NANA
KV441404.1 262446UTR22442-2_NJ_2009OAF56419.1Hypothetical protein
KV441387.1 430984Intergenic23874-1_ME_2012NANA
KV441387.1 820735UTR22426-2_CT_2009OAF62808.1Hypothetical protein
KV441387.1 1825781Intergenic22948-1_TN_2010NANA
KV441387.1 2082665UTR22442-2_NJ_2009OAF62574.1ESCRT-I complex subunit VPS28
KV441387.1 685734Intergenic22442-2_NJ_2009NANA
KV441387.1 785423Intergenic23897-2_MO_2012NANA
KV441387.1 54855Intergenic22971-3_ON_2010NANA
KV441387.1 193542Intergenic22948-1_TN_2010NANA
KV441387.1 253155Intergenic22442-2_NJ_2009NANA
KV441387.1 77282Intergenic23455-1_VA_2011NANA
KV441387.1 120236Intergenic23897-2_MO_2012NANA
KV441388.1 775461Intragenic22972-2W_ON_2010OAF61744.1Hypothetical protein
KV441388.1 950597Intron23897-2_MO_2012OAF61915.1Hypothetical protein
KV441388.1 120202UTR22469-1_VA_2009OAF62044.1Hypothetical protein
KV441388.1 57283UTR20631-21_NY_2008OAF61813.1Hypothetical protein
KV441389.1 343287Intron23455-1_VA_2011OAF61688.1AGC/AKT protein kinase
KV441389.1 419134Intergenic23414-1W_IN_2011NANA
KV441389.1 867065UTR22004-1_CT_2008OAF61368.1Actin cytoskeleton-regulatory complex protein end3
KV441389.1 1173430Intergenic22971-3_ON_2010NANA
KV441389.1 1173432Intergenic22971-3_ON_2010NANA
KV441389.1 50002UTR22948-1_TN_2010OAF61394.1Hypothetical protein
KV441390.1 643943Intergenic23897-2_MO_2012NANA
KV441390.1 659862UTR22948-1_TN_2010OAF61216.1Hypothetical protein
KV441390.1 861423UTR22948-1_TN_2010OAF60933.1Hypothetical protein
KV441390.1 1243398UTR23434-1W_IN_2011OAF60771.1Hypothetical protein
KV441390.1 1524359UTR22948-1_TN_2010OAF60872.1Hypothetical protein
KV441391.1 151986UTR20693-1_MA_2008OAF60366.1Hypothetical protein
KV441391.1 1184294Intergenic22442-2_NJ_2009NANA
KV441392.1 712894Intergenic23414-1W_IN_2011NANA
  • a UTR, untranslated region of exon.

  • b NA, not available.