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Research Article

Population Genomic Analysis of 1,777 Extended-Spectrum Beta-Lactamase-Producing Klebsiella pneumoniae Isolates, Houston, Texas: Unexpected Abundance of Clonal Group 307

S. Wesley Long, Randall J. Olsen, Todd N. Eagar, Stephen B. Beres, Picheng Zhao, James J. Davis, Thomas Brettin, Fangfang Xia, James M. Musser
Steven J. Projan, Editor
S. Wesley Long
a Center for Molecular and Translational Human Infectious Diseases Research, Department of Pathology and Genomic Medicine, Houston Methodist Research Institute and Houston Methodist Hospital, Houston, Texas, USA
b Department of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, New York, USA
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Randall J. Olsen
a Center for Molecular and Translational Human Infectious Diseases Research, Department of Pathology and Genomic Medicine, Houston Methodist Research Institute and Houston Methodist Hospital, Houston, Texas, USA
b Department of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, New York, USA
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Todd N. Eagar
a Center for Molecular and Translational Human Infectious Diseases Research, Department of Pathology and Genomic Medicine, Houston Methodist Research Institute and Houston Methodist Hospital, Houston, Texas, USA
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Stephen B. Beres
a Center for Molecular and Translational Human Infectious Diseases Research, Department of Pathology and Genomic Medicine, Houston Methodist Research Institute and Houston Methodist Hospital, Houston, Texas, USA
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Picheng Zhao
a Center for Molecular and Translational Human Infectious Diseases Research, Department of Pathology and Genomic Medicine, Houston Methodist Research Institute and Houston Methodist Hospital, Houston, Texas, USA
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James J. Davis
c Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne, Illinois, USA
d Computation Institute, University of Chicago, Chicago, Illinois, USA
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Thomas Brettin
c Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne, Illinois, USA
d Computation Institute, University of Chicago, Chicago, Illinois, USA
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Fangfang Xia
c Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne, Illinois, USA
d Computation Institute, University of Chicago, Chicago, Illinois, USA
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James M. Musser
a Center for Molecular and Translational Human Infectious Diseases Research, Department of Pathology and Genomic Medicine, Houston Methodist Research Institute and Houston Methodist Hospital, Houston, Texas, USA
b Department of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, New York, USA
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Steven J. Projan
MedImmune
Roles: Editor
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Michael Dunne
bioMérieux, Inc.
Roles: Solicited external reviewer
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Robert Bonomo
Louis Stokes Veterans Affairs Medical Center
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DOI: 10.1128/mBio.00489-17
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Article Information

DOI 
https://doi.org/10.1128/mBio.00489-17
PubMed 
28512093

Published By 
American Society for Microbiology
History 
  • Received April 1, 2017
  • Accepted April 18, 2017
  • Published online May 16, 2017.

Copyright & Usage 
Copyright © 2017 Long et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license .
Editors and / or Reviewers 
  • Steven J. Projan, Editor, MedImmune
  • Michael Dunne, Solicited external reviewer, bioMérieux, Inc.
  • Robert Bonomo, Solicited external reviewer, Louis Stokes Veterans Affairs Medical Center

Author Information

  1. S. Wesley Longa,b,
  2. Randall J. Olsena,b,
  3. Todd N. Eagara,
  4. Stephen B. Beresa,
  5. Picheng Zhaoa,
  6. James J. Davisc,d,
  7. Thomas Brettinc,d,
  8. Fangfang Xiac,d,
  9. James M. Mussera,b
  1. a Center for Molecular and Translational Human Infectious Diseases Research, Department of Pathology and Genomic Medicine, Houston Methodist Research Institute and Houston Methodist Hospital, Houston, Texas, USA
  2. b Department of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, New York, USA
  3. c Computing, Environment and Life Sciences, Argonne National Laboratory, Argonne, Illinois, USA
  4. d Computation Institute, University of Chicago, Chicago, Illinois, USA
  • Address correspondence to James M. Musser, jmmusser{at}houstonmethodist.org.
  • Citation Long SW, Olsen RJ, Eagar TN, Beres SB, Zhao P, Davis JJ, Brettin T, Xia F, Musser JM. 2017. Population genomic analysis of 1,777 extended-spectrum beta-lactamase-producing Klebsiella pneumoniae isolates, Houston, Texas: unexpected abundance of clonal group 307. mBio 8:e00489-17. https://doi.org/10.1128/mBio.00489-17 .

  1. This article is a direct contribution from a Fellow of the American Academy of Microbiology.

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Population Genomic Analysis of 1,777 Extended-Spectrum Beta-Lactamase-Producing Klebsiella pneumoniae Isolates, Houston, Texas: Unexpected Abundance of Clonal Group 307
S. Wesley Long, Randall J. Olsen, Todd N. Eagar, Stephen B. Beres, Picheng Zhao, James J. Davis, Thomas Brettin, Fangfang Xia, James M. Musser
mBio May 2017, 8 (3) e00489-17; DOI: 10.1128/mBio.00489-17

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Population Genomic Analysis of 1,777 Extended-Spectrum Beta-Lactamase-Producing Klebsiella pneumoniae Isolates, Houston, Texas: Unexpected Abundance of Clonal Group 307
S. Wesley Long, Randall J. Olsen, Todd N. Eagar, Stephen B. Beres, Picheng Zhao, James J. Davis, Thomas Brettin, Fangfang Xia, James M. Musser
mBio May 2017, 8 (3) e00489-17; DOI: 10.1128/mBio.00489-17
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KEYWORDS

Genome, Bacterial
Klebsiella Infections
Klebsiella pneumoniae
beta-lactamases

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